PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.4U4XR
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 342aa    MW: 38522.4 Da    PI: 4.6915
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.4U4XRgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.4e-12182225654
                  HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                   ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  Araip.4U4XR 182 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 225
                  589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.491176225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.41E-15178240IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-12182231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-9182225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.76E-5183230No hitNo description
Gene3DG3DSA:4.10.280.101.1E-14183239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00306268309No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MELSQLGFLE ELLLLAPRRV EETCWNNGFN DLLPTTPPPS ASVSASWSFD SLDDNPSLNP  60
SFSSFSTPLD HRFDSSYAAS FPFLDAFTIP PELHHSPPPL LPQQEHNNNN NNHPLVEEEE  120
EELGFLGNDD NNQSLEERNS GRCKVEEQQA LEVPAVVFNM GMCGEKKVPK SKKLEGQPSK  180
NLMAERRRRK RLNDRLSMLR SIVPKISKMD RTSILGDTID YMKELLERIA KLQEETMEEE  240
GKNQIHLLGI SKELKPNEFD VERRDHDTRI SICCATKPGL LLSTVNTLEA LGLEIHQCVI  300
SGFNDFSMQA SCSEVAEERN CISTEDVKQA LFKNAGYGGR CV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184191ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015963319.10.0PREDICTED: transcription factor bHLH93-like
SwissprotQ9LSL14e-81BH093_ARATH; Transcription factor bHLH93
TrEMBLA0A0B2PBB41e-146A0A0B2PBB4_GLYSO; Transcription factor bHLH93
STRINGGLYMA01G02390.11e-145(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-81beta HLH protein 93